All SCCWRP publications co-authored by Dr. Susanna Theroux
PublicationPub. TypePub. YearSCCWRP Pub. #Related Topic Areas

Kelly, R.P., D.M. Lodge, K.N. Lee, S. Theroux, A.J. Sepulveda, C.A. Scholin, J.M. Craine, E.A. Allan, K.M. Nichols, K.M. Parsons, K.D. Goodwin, Z. Gold, F.P. Chavez, R.T. Noble, C.L. Abbott, M.R. Baerwald, A.M. Naaum, P.M. Thielen, A.L. Simons, C.L. Jerde, J.J. Duda, M.E. Hunter, J.A. Hagan, R.S. Meyer, J.A. Steele, M.Y. Stoeckle, H.M. Bik, C.P. Meyer, E.D. Stein, K.E. James, A.C. Thomas, E. Demir-Hilton, M.A. Timmers, J.F. Griffith, M.J. Weise, S.B. Weisberg. 2024. Toward a national eDNA strategy for the United States. Environmental DNA DOI:10.1002/edn3.432.

Journal Article20241336Bioassessment, DNA Barcoding

Smith, J., D. Shultz, A. Lie, S. Theroux. 2023. Diversity and Prevalence of Cyanobacteria and Cyanotoxins in Los Angeles Region Recreational Lakes and Reservoirs. Technical Report 1309. Southern California Coastal Water Research Project. Costa Mesa, CA.

Technical Report20231309Eutrophication, Harmful Algal Blooms

Simons, A.L., S. Theroux, M. Osborne, S. Nuzhdin, R.D. Mazor, J.A. Steele. 2023. Zeta diversity patterns in metabarcoded lotic algal assemblages as a tool for bioassessment. Ecological Applications DOI:10.1002/eap.2812.

Journal Article20231319Bioassessment, DNA Barcoding, Indices Of Biotic Integrity

Stepien, C.A., S. Theroux, S.B. Weisberg. 2022. The Second National Workshop on Marine eDNA: A workshop to accelerate the incorporation of eDNA science into environmental management application. Environmental DNA DOI:10.1002/edn3.379.

Journal Article20221300Bioassessment, DNA Barcoding

Mazor, R.D., M. Sutula, S. Theroux, M. Beck, P.R. Ode. 2022. Eutrophication thresholds associated with protection of biological integrity in California wadeable streams. Ecological Indicators 142:109180.

Journal Article20221282Bioassessment, Eutrophication, Harmful Algal Blooms, Indices Of Biotic Integrity

Howard, M.D.A., J. Smith, D.A. Caron, R.M. Kudela, K. Loftin, K. Hayashi, R. Fadness, S. Fricke, J. Kann, M. Roethler, A. Tatters, S. Theroux. 2022. Integrative monitoring strategy for marine and freshwater harmful algal blooms and toxins across the freshwater‐to‐marine continuum. Integrated Environmental Assessment and Management DOI:10.1002/ieam.4651.

Journal Article20221279Eutrophication, Harmful Algal Blooms, Regional Monitoring

Irving, K., K.T. Taniguchi-Quan, A. Aprahamian, C. Rivers, G. Sharp, R.D. Mazor, S. Theroux, A. Holt, R. Peek, E.D. Stein. 2022. Application of Flow-Ecology Analysis to Inform Prioritization for Stream Restoration and Management Actions. Frontiers in Environmental Science 9:787462.

Journal Article20221251Ecohydrology

Bueno de Mesquita, C.P., J. Zhou, S. Theroux, S.G. Tringe. 2021. Methanogenesis and Salt Tolerance Genes of a Novel Halophilic Methanosarcinaceae Metagenome-Assembled Genome from a Former Solar Saltern. Genes 12:1609.

Journal Article20211231Uncategorized

Zhou, J., S. Theroux, C.P. Bueno de Mesquita, W.H. Hartman, Y. Tian, S.G. Tringe. 2021. Microbial drivers of methane emissions from unrestored industrial salt ponds. The ISME Journal DOI:10.1038/s41396-021-01067-w.

Journal Article20211226Climate Change

Charles, D.F., M.G. Kelly, R.J. Stevenson, S. Poikane, S. Theroux, A. Zgrundo, M. Cantonati. 2021. Benthic algae assessments in the EU and the US: Striving for consistency in the face of great ecological diversity . Ecological Indicators DOI:10.1016/j.ecolind.2020.107082.

Journal Article20211191Bioassessment, DNA Barcoding, Eutrophication, Indices Of Biotic Integrity

Howard, M.D.A., R.M. Kudela, K. Hayashi, A.O. Tatters, D.A. Caron, S. Theroux, S. Oehrle, M. Roethler, A. Donovan, K. Loftin, Z. Laughrey. 2021. Multiple co-occurring and persistently detected cyanotoxins and associated cyanobacteria in adjacent California lakes. Toxicon 192:1-14.

Journal Article20211172Eutrophication, Harmful Algal Blooms

Theroux, S., R.D. Mazor, M.W. Beck, P.R. Ode, E.D. Stein, M. Sutula. 2020. Predictive biological indices for algae populations in diverse stream environments. Ecological Indicators DOI:10.1016/j.ecolind.2020.106421.

Journal Article20201135Bioassessment, DNA Barcoding, Eutrophication, Indices Of Biotic Integrity

Paul, M.J., B. Jessup, L.R. Brown, J.L. Carter, M. Cantonati, D.F. Charles, J. Gerritsen, D.B. Herbst, R. Stancheva, J. Howard, B. Isham, R. Lowe, R.D. Mazor, P.K. Mendex, P.R. Ode, A. O'Dowd, J. Olson, Y. Pan, A.C. Rehn, S. Spaulding, M. Sutula, S. Theroux. 2020. Characterizing benthic macroinvertebrate and algal biological condition gradient models for California wadeable Streams, USA. Ecological Indicators DOI:10.1016/j.ecolind.2020.106618.

Journal Article20201140Bioassessment, Indices Of Biotic Integrity

Aylagas, E., A. Borja, X. Pochon, A. Zaiko, N. Keeley, K. Bruce, P. Hong, G.M. Ruiz, E.D. Stein, S. Theroux, N. Geraldi, A. Ortega, L. Gajdzik, D.J. Coker, Y. Katan, T. Hikmawan, A. Saleem, S. Alamer, B.H. Jones, C.M. Duarte, J. Pearman, S. Carvalho. 2020. Translational Molecular Ecology in practice: Linking DNA-based methods to actionable marine environmental management. Science of the Total Environment DOI:10.1016/j.scitotenv.2020.140780.

Journal Article20201131Bioassessment, DNA Barcoding

Beck, M.W., C. O'Hara, J.S. Stewart-Lowndes, R.D. Mazor, S. Theroux, D.J. Gillett, B. Lane, G. Gearheart. 2020. The importance of open science for biological assessment of aquatic environments. PeerJ DOI:10.7717/peerj.9539.

Journal Article20201132Bioassessment

Simons, A.L., R.D. Mazor, S. Theroux. 2019. Using Co‐occurrence Network Topology in Assessing Ecological Stress in Benthic Macroinvertebrate Communities. Ecology and Evolution DOI:10.1002/ece3.5751.

Journal Article20191099Bioassessment, DNA Barcoding, Indices Of Biotic Integrity

Beck, M., R.D. Mazor, S. Theroux, K.C. Schiff. 2019. The Stream Quality Index: A multi-indicator tool for enhancing environmental management. Environmental and Sustainability Indicators DOI:10.1016/j.indic.2019.100004.

Journal Article20191091Bioassessment, Indices Of Biotic Integrity, Runoff Water Quality, Southern California Stormwater Monitoring Coalition

Beck, M., R.D. Mazor, S. Theroux, K.C. Schiff. 2019. The Stream Quality Index: A Multi-Indicator Tool for Enhancing Environmental Management Communication. Technical Report 1080. Southern California Coastal Water Research Project. Costa Mesa, CA.

Technical Report20191080Bioassessment, Indices Of Biotic Integrity, Runoff Water Quality, Southern California Stormwater Monitoring Coalition